#!/bin/sh
set -e

stacks -h
echo ""

# Programs available with Stacks wrapper
stacks clone_filter -h
stacks cstacks -h
stacks denovo_map -h
stacks gstacks -h
stacks kmer_filter -h
stacks phasedstacks -h
stacks populations -h
stacks process_radtags -h
stacks process_shortreads -h
stacks ref_map -h
stacks sstacks -h
stacks stacks-dist-extract -h
stacks stacks-gdb -h
stacks stacks-integrate-alignments -h
stacks stacks-samtools-tview -h
stacks tsv2bam -h
stacks ustacks -h
